Schema for tra Isoform - FlyBase Annotation for tra-RA

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Schema for tra Isoform - FlyBase Annotation for tra-RA

Database: dm3gene Primary Table: single_gene Row Count: 1

field	example	SQL type	info
`chrom`	contig1	`varchar(255)`	values
`chromStart`	9850	`int(10) unsigned`	range
`chromEnd`	10842	`int(10) unsigned`	range
`name`	tra-RA	`varchar(255)`	values
`score`	1000	`int(10) unsigned`	range
`strand`	+	`char(1)`	values
`thickStart`	9857	`int(10) unsigned`	range
`thickEnd`	10756	`int(10) unsigned`	range
`reserved`	0	`int(10) unsigned`	range
`blockCount`	3	`int(11)`	range
`blockSizes`	47,404,236,	`longblob`
`chromStarts`	0,295,756,	`longblob`
`id`	FBtr0075364	`varchar(255)`	values
`description`	transformer, isoform A	`longblob`

Sample Rows

chrom	chromStart	chromEnd	name	score	strand	thickStart	thickEnd	reserved	blockCount	blockSizes	chromStarts	id	description
contig1	9850	10842	tra-RA	1000	+	9857	10756	0	3	47,404,236,	0,295,756,	FBtr0075364	transformer, isoform A

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

tra Isoform (single_gene) Track Description


	Description This track shows one of the isoforms of the tra gene annotated by FlyBase. References St. Pierre SE, Ponting L, Stefancsik R, McQuilton P, and the FlyBase Consortium. FlyBase 102 - advanced approaches to interrogating FlyBase. Nucleic Acids Res. 2014 42(D1):D780-D788.