Schema for Landing Pad Lines (R5) - phiC31 Landing Pad Insertion Lines (R5)

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Schema for Landing Pad Lines (R5) - phiC31 Landing Pad Insertion Lines (R5)

Database: dm6 Primary Table: landing_pad_lines Row Count: 12

field	example	SQL type	info
`bin`	738	`smallint(5) unsigned`	range
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	20148547	`int(10) unsigned`	range
`chromEnd`	20148548	`int(10) unsigned`	range
`name`	312_Bellen	`varchar(255)`	values
`score`	1000	`int(10) unsigned`	range
`strand`	-	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	score	strand
738	chr2L	20148547	20148548	312_Bellen	1000	-
748	chr2L	21419979	21419980	2100_Bellen	1000	-
749	chr2L	21540807	21540808	217_Bellen	1000	+
749	chr2L	21572960	21572961	1310_Bellen	1000	+
585	chr4	58504	58505	9742_Venken	1000	+
586	chr4	247380	247381	MI00276_Bellen	1000	+
587	chr4	307687	307688	9/19_Monica	1000	-
587	chr4	359489	359490	745_Monica	1000	+
588	chr4	410894	410895	MI00166_Bellen	1000	-
588	chr4	463838	463839	Mi{MIC}bip2MI00014_Bellen	1000	-

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

Landing Pad Lines (R5) (landing_pad_lines) Track Description


	Description This track shows the locations of the variegating phiC31 landing-pad insertion lines with the 1360 DNA transposon and an hsp70-driven white reporter. References Sentmanat MF and Elgin SCR. Ectopic assembly of heterochromatin in Drosophila melanogaster triggered by transposable elements. Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):14104-9.