RepeatModeler Track Settings
 
Transposons Identified by RepeatModeler   (All Variation and Repeats tracks)

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Show only items with score at or above:   (range: 0 to 1000)


Display data as a density graph:

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 Configure 		 DNA Trans.  DNA Transposons   Schema 
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 Configure 		 LINE  Non-LTR Retrotransposons   Schema 
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 Configure 		 SINE  SINE Retrotransposons   Schema 
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 Configure 		 LTR  LTR Retrotransposons   Schema 
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 Configure 		 Helitrons  Rolling-Circle Helitrons   Schema 
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 Configure 		 Unclassified  Unclassified Transposons   Schema 
    

Description

This track shows the repeats identified by RepeatMasker using a species-specific repeat library constructed by RepeatModeler.

References

Flynn JM et al. RepeatModeler2 for automated genomic discovery of transposable element families. Proc Natl Acad Sci U S A. 2020 Apr 28;117(17):9451-9457. doi: 10.1073/pnas.1921046117.