Hi-C PCA 1 Track Settings
 
HiCExplorer First Eigenvector from hicPCA   (All Hi-C Tracks)

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Data last updated at UCSC: 2024-10-23 14:36:53

Description

This track shows the scores for the first eigenvector from the Principal Component Analysis (PCA) of the Hi-C data. The values were calculated by the hicPCA program in HiCExplorer to define the A/B compartments.

Accession Number for Hi-C Data

The Hi-C data was obtained from NCBI using the following accession number:

References

Wolff J, Rabbani L, Gilsbach R, Richard G, Manke T, Backofen R, Grüning BA. Galaxy HiCExplorer 3: a web server for reproducible Hi-C, capture Hi-C and single-cell Hi-C data analysis, quality control and visualization. Nucleic Acids Res. 2020 Jul 2;48(W1):W177-W184. doi: 10.1093/nar/gkaa220.