InterProScan Track Settings
 
InterPro Signatures Identified by InterProScan   (All Genes and Gene Prediction Tracks)

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 Configure 		 CDD  NCBI Conserved Domain Database (CDD)   Schema 
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 Configure 		 Coils  Coiled Coil Regions in Proteins   Schema 
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 Configure 		 HAMAP  High-quality Automated and Manual Annotation of Proteins Database (HAMAP)   Schema 
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Description

This track shows matches to protein signatures in the InterPro database that were identified by InterProScan. InterPro includes protein signatures from 14 member databases (see the "InterPro consortium member databases" page for details). InterProScan uses programs and analysis workflows optimized for each member database to perform the searches and filter the results.

RefSeq protein sequences from the D. ananassae genome were obtained from NCBI, and analyzed by InterProScan. The matches to the protein signatures were projected to the corresponding RefSeq transcripts and the genomic sequences using the pslMap program developed by the UCSC Genome Browser Project Team.

References

Paysan-Lafosse T, et al. InterPro in 2022. Nucleic Acids Res. 2023 Jan 6;51(D1):D418-D427.

Jones P, et al. InterProScan 5: genome-scale protein function classification. Bioinformatics. 2014 May 1;30(9):1236-40.