Hi-C Matrix Track Settings
 
Juicer Hi-C Matrix (Adult Female)   (All Hi-C Tracks)

Display mode:   

Items are drawn in shades of the chosen color depending on score - scores above the chosen maximum are drawn at full intensity.

Score normalization:    Maximum:   Auto-scale:

Draw mode:    Resolution:    Color:

Filter by interaction distance in bp (0 for no limit): minimum maximum


Metadata from file header:

1.0

0000000000000000

0000000000000000

Juicer Tools Version 1.22.01

For questions concerning the content of a file's metadata header, please contact the file creator.

View table schema

Description

This track shows the Hi-C matrix for the D. willistoni adult female whole body sample. The Hi-C matrix was produced by the pre command in Juicer Tools.

Accession Number for Hi-C Data

The Hi-C data was obtained from NCBI using the following accession number:

References

Durand NC, Shamim MS, Machol I, Rao SS, Huntley MH, Lander ES, Aiden EL. Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments. Cell Syst. 2016 Jul;3(1):95-8. doi: 10.1016/j.cels.2016.07.002.