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Display chromosome ideogram above main graphic
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Configure Tracks on UCSC Genome Browser: bFriCoe1.1 Sep. 2023 chaffinch (primary hap 2023) (GCA_963513975.1)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
All Gaps All gaps of unknown nucleotides (N's), including AGP annotated gaps
Assembly Assembly
Gap (AGP defined) AGP gap
GC Percent GC Percent in 5-Base Windows
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
Tandem Dups Paired identical sequences
-   Genes and Gene Predictions    
Augustus Augustus Gene Predictions
-   mRNA and EST    
RefSeq mRNAs RefSeq mRNAs mapped to this assembly
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
-   Variation and Repeats    
RepeatMasker RepeatMasker Repetitive Elements
RepeatModeler RepeatModeler Repetitive Elements
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust